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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mup-4
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWVPLVLLP LIASAATTYQ HRQTYSSLQC RVNDPLSCNQ AKSEVCVFVN GQYRCECPVG  60
   61 VSRLADGRCL VVNECARPSL NACHKDAQCV DLAEGYTCRC NSGFADTSPD KVNKPGRQCQ 120
  121 KTTNECGAKQ TYGVDCDENA ACVDTPEGFQ CVCQPGYADV STSISKLPGR KCVESVNECT 180
  181 NGEADCSNNA DCFDRADGYE CKCRPGFVDA SPNVDKYPGR VCNKPKAPEY YGQQSRQPQC 240
  241 SEGSGCGPNE ECRFNTAGEK VCQCRRGSVQ QSNGVCKVFS QCEQANECDR NAFCSNTYDG 300
  301 PKCQCKDGFL DVSPDPVRLP GRKCQQVRNE CADGSHDCSH QAACQDTPTG YICSCNSNCI 360
  361 DVSSRYNLPP GRKCSVAANQ CSDKSLNSCD ENADCVQLPD GYTCKCFAGY VDVSSNANLP 420
  421 PGRVCTLSTA CPAQPTDLVF LIDGSGSIGS YVFQTEVLRF LAEFTELFDI APQKTRVSVV 480
  481 QYSDQIRHEF GLDNYSDRKS LQNAIRNIEY LTGLTRTGAA IEHVANEAFS ERRGARPVGQ 540
  541 VSRVAIVITD GRSQDNVTRP SDNARRQDIQ LFAVGVTNHV LDAELEEISG SKDRTFHVSG 600
  601 FEDLNTRLRS AIQRVACPHQ NNEDTYNKGP CDPSNHNGCD RSLNQVCQQK NGKFVCACPA 660
  661 GFDIHPVTKV CGGDICNPEI ATSCPDPEIC EKTPFGNWRC TCPADLGWRD RLTGVCKIGE 720
  721 KPVQTSESND ECSPNDVHSC PANSKCEKGA GGEFICKCDA GFQRNGRTNK CEAPGTCDPR 780
  781 MPDSCDARKK EKCLPDGRGA FACMCDRHHK RHPVTDICLI DECAAGVADC DPNAKCTDTD 840
  841 ESYICTCNEG FLDKSPEQNK KPGRVCSKQR NECLDGTHNC SMNADCIDLP DGFLCRCKED 900
  901 FVDISPNPNA FGGIDCRALV NECLITGGHN CHEHAICIDT RDSYKCQCKE GYVDHDELRN 960
  961 PGRTCKKLNQ ICESGKHECD KNARCVEKGA NDYECVCNAG FIDKSPLTHR PGRKCVEPIC1020
 1021 SDDSKHDCHS AAICEENDSV PEKYTCKCRD GYLDVGAVMG GGKSGRECKE LVNECLSASL1080
 1081 NSCDAAATCI DLDDGYTCKC PLGSKDESPV PKLPGRSCKG LVNECNIPHL NNCSHFATCI1140
 1141 DLEEGYECKC KPEYHDQKPE QPGTECKFII NECLAENLND CSPNAMCIDK IDGYDCKCKA1200
 1201 PFQDEMPSNP GRICRFDECA DPKDNDCDKH ALCIDTDDSY TCQCKEGFFD EISDPKKPGR1260
 1261 VCIGLVIEPQ NQSEDPTTPD PNTIKCGNGL CHLDLGEVCV GGATCSCRPG ESRDNEKEKC1320
 1321 VPTTSIPLVV RVMEYDGEPI QYRTDYSKPD TQAHIEIVDA VKKSVGKIIG KTDVAPRFVT1380
 1381 TDVNYITNPK VQNSEWDKGL LGNVSVHLAG KEEVDKCRFY EQFAEIVREM GGRVDRIKLS1440
 1441 DDADLDPCKK EEEKKGIPCG NTFCSIELGE ECIAGKICGC PKGQKRKDAN SPCRAVESWN1500
 1501 LPLYVIRDGH EKITYSPSLS NPLNDDHKDL VSRFESGVAQ SYDKTPLKGA FVTAEVNEIE1560
 1561 NPESRKKSWD TGILYNFTSH FVKGSVAEPA SVFTDLIDYI QKRNDFEVGK SKLFISPEQL1620
 1621 NPFSNCYHSD CHPDAICKEV GKGYTCTCPD GFRDLNPSRP GRNCLSYRGV NECEKPELNE1680
 1681 CSPHARCIDL DYLYKCECIR PYVNSAVGDA LPGSVCSIDY CQDVNYCPLN STCVNVDEQA1740
 1741 RCDCKPGFVD LRKSGHLSEA GLGESICRRQ SDIDECALGL HNCSAAAICI DKKIGYECQC1800
 1801 QEGYEDGNPS QPGRICAASL CGLCNGHGDC IHDALSSNVT CACLDGYTGQ FCETAPSNLP1860
 1861 LILMTLLALL FLLLTLLCCL YMCARCRCFG ARGRSEGSAS GQEILGSDYY TIPRAKLARP1920
 1921 LYGDEMGDDH AGALAAYLDD GASISSDGSI EEIERRVTTD VTTREVRTTT VRDDDGNIIS1980
 1981 QSQTISHGNP HETDTEQYGM ISSDHYKTSA SEAMDAAMST SASGAAYNQS SGAMMSSASG2040
 2041 HKSAYNQGYA SDSEDSDAGH AVYDRTTRTN QSHDFEPGAD PRTGTERSKR EFVTTTKAEE2100
 2101 VNYF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle