YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mps-3
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSTQRPPA PTSGSSSTPW TKVVIFIIIG ILIVAFIVFA AASIVKYIKS KKQQKQPKKK  60
   61 TKKSTKSRSK SLKSKQSAVT PKKRASPIPP QPAPPSSPKP TEESATPSSS FAPSTEPTPT 120
  121 VPDKVDDGSE DTEHKEQEQQ TVLCTYGNGW KSKNQPPHDF SFSIESE

Type	Start	End	Confidence
Non-Cytoplasmic	1	22	0.75
Transmembrane Helix	23	45	0.92
Cytoplasmic	46	167	0.78