YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE29449
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKDECPVLT LVLCNARVIL AYDWLDDLKQ FLNLYTDFVP KYSDEIPYHL TESGRRQTFS  60
   61 KTHDGAIIER NAHATDSASS HFPTFSFKIT HRDSDLYLLE NLFVKNSCNN SVNFCYRSCQ 120
  121 NDLPIVVQGC SCFEGSYSRI KNYKEAQKKS LIPINVPQPP SKPIDIAIYM IQTEHTDLWI 180
  181 LDDLQSNSIP LLRLSVAHVC LKKTGERIIA SFHVSMDYFN QRIFGWEPVI EEWKIHRFLH 240
  241 NKKDLKQTIE WVAETKTPLL INKASIGEGT LLFTKMADSK GHLLDMYCHV RLGVAQAISV 300
  301 SLWVPYWIVN KSGIPLIIQQ EAVKWEAAGQ MEEHEKAKDR HPLMFSFADE NCPKACRLSC 360
  361 SSLCQYHNVW RTRIIGNCCI VNQMLDRTMM IGASRSPAEL NCTSTWLLCY NLVGGELVSL 420
  421 STKQY

Type	Start	End	Confidence
Signal Peptide	1	16	0.53
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	425	0.97