YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	fut-3
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVRPASVYR YLLLGVCALL GIYTVYSIIG YDDGSHVPIH RPQRHLYLTV SQDRIGSRFG  60
   61 KLAPKRILYW TTIFGATVPS TALSDCPGLT DRCVIDTNRH QLDSADAVVF HAADISKFPL 120
  121 PVSRKPDQIF VFNSMETPDN SGRFAVPDGF FNWTSTHLYS SDAIHKYGTF LIPTQIAESR 180
  181 GFKVQSYYVQ PKRLVKTMKG IFGLISNCHT KSKRELALQE LGKHINVTIG GKCASDDRLK 240
  241 SICPAGVECI DVFEQYPFYI AIENTVCNDY VTEKIWSRIT VPSIPIVMRR RVYQNILPPK 300
  301 SFIAMDDYKN PSEMANHLRS LEANSTAYGE YFEWRQKGLW TSAPWNAPGY RNGLCRVCEL 360
  361 LWKAKDNETE VYKSYDNIWK WFDNESQCET DEFVRSWLSG

Type	Start	End	Confidence
Signal Peptide	1	27	0.63
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	400	0.98