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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE29244
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAHTHRINK CLYGQNQMRN RHALLGALPP IFLLLLPLIS CMKFDPERIA ARLRIDEKWD  60
   61 QLDAFQSIKS RRGRQIQPKE ISIQVTAPLF SSRLFDYGTT AGDEELPQAL DVGKKLDLVH 120
  121 PISFFGSDYK TIYILSNGAV GFEASSRSYK SGILPSSTRF LAPFWNRNDL RNGGKVYYRE 180
  181 VTKGRVLERG QSEIRYQYDK NVKVKSALII TWDKMQPLNT AALPEENTNT FQAAIFITAN 240
  241 GTFANFIYSN IGWTQGAEAG FNAGDATNHF KLPTSGTPNI MYLEEYGNTG IPGEWMFELS 300
  301 ELRVISCKSG IKGDTCDQEC SNGEWGPDCA YCCHCSEGTC HPISGDCQRG CATCWDGVAC 360
  361 QTRQEKCATK TQCASNALSF NDYDRCGEPI QRCQCLNGYK GDGYNNCEDV DECKTNSTIC 420
  421 HKNAICTNTP GRYFCMCKEG FSGDGQNDCS QSFLFQYDTH HQLPRKKNSK MEWNLKKPLK 480
  481 IFGETTEKLT VTSTGLIAIN EVNRDNGRLE DMQLVGIAPF FGPIDLSRNG AKGNTFQALL 540
  541 IDGSNSKNEK MTFVELMYRD LPWASGAEAG ILSSDASSSI LLPASGTEAI SQLSKNSNIK 600
  601 QPGTWLYRID KAQLMPCAQP IQVPPYCDRL LSTAPRLPSK LLEEKKEGLT LPSPGAFLVD 660
  661 QPSETIVPTL VRGGGTVTRG RNVLTVTTSP IGNQQRQQTT KAVTRPRPNF SSTPHRPIVS 720
  721 LSDEDFELGP DAFEVTFPPF VTVQPELFRP NQRNGVQKST QRPLPDFSIR TPLKEEATTS 780
  781 VPREKTSSAA PAHSPIEEMS ENEESPFEAG SFDGEAVKFN EELEAIDKAL QTTKKQRPEL 840
  841 SVTPQPEDLS GDARVIETTE EDEEEAEIST ETTTEMSSTT TTTKAHTTTT TMMIPTEAPP 900
  901 SIFVFTTTQK PRAQSTTQKR IIVQQPSIVV NSQPPKQRND NQPTVNVGHA EEQSPRLAIL 960
  961 LPVMIILAWL VILVCIGAVV CCKRRNSRES SQLRAMYGAA YGVRPTAYES KRKESTYEDH1020
 1021 LERAARLSGQ PALSGQQAGK VSLYGSYWNL EPLSNHSPAR LSTQERQSPP SFVNNGYTNQ1080
 1081 TTRYTYAGHY 

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