YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE29243
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFVELMYRD LPWASGAEAG ILSSDASSSI LLPASGTEAI SQLSKNSNIK QPGTWLYRID  60
   61 KAQLMPCAQP IQVPPYCDRL LSTAPRLPSK LLEEKKEGLT LPSPGAFLVD QPSETIVPTL 120
  121 VRGGGTVTRG RNVLTVTTSP IGNQQRQQTT KAVTRPRPNF SSTPHRPIVS LSDEDFELGP 180
  181 DAFEVTFPPF VTVQPELFRP NQRNGVQKST QRPLPDFSIR TPLKEEATTS VPREKTSSAA 240
  241 PAHSPIEEMS ENEESPFEAG SFDGEAVKFN EELEAIDKAL QTTKKQRPEL SVTPQPEDLS 300
  301 GDARVIETTE EDEEEAEIST ETTTEMSSTT TTTKAHTTTT TMMIPTEAPP SIFVFTTTQK 360
  361 PRAQSTTQKR IIVQQPSIVV NSQPPKQRND NQPTVNVGHA EEQSPRLAIL LPVMIILAWL 420
  421 VILVCIGAVV CCKRRNSRES SQLRAMYGAA YGVRPTAYES KRKESTYEDH LERAARLSGQ 480
  481 PALSGQQKTT SESTLIECVR L

Type	Start	End	Confidence
Non-Cytoplasmic	1	407	0.98
Transmembrane Helix	408	432	0.90
Cytoplasmic	433	501	0.97