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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE29229
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIEIISKN SFVTVIIILA VPIIVILPLV LLLEAGKIGG EVSENCSNHS TSSASPKPKP  60
   61 MCLTPECITL VHQLLNFQDP SVDPCENFYQ AACGKYNEHN VIDGSRTAQK QQIVKRLIRD 120
  121 FLHKNQSSTS KSENSMKLLY EKCKEAKTIK VLGNQNLLQE IFMNIQKIGS WPVLDENWDG 180
  181 KKFNLNEMLL SLIRLGVSNF GFFEIIISSD AFVEIKPARN FPTRENLSDI ISKVFLGNGF 240
  241 QPNITAIEND LREYENLQRE LKSITSDYPT EELSFAELQT LVPSLERLIQ TTPNRSLVNY 300
  301 LIFNYLKSVM LEYKRLPEEQ CEGVVIDFLP RASTRVFVQN FLDKENRKYV AGMIEDVKMG 360
  361 FIDMIQESTW LNEESKKVAV QKVKNIKSMI GYPDFFEPPG TLDRSFKDLN IEQTDSYHTI 420
  421 VRKIQKFTNE QCMEFVASEI PLDPRQPILH ANAFYQNTNF LAILAPVLDD PIFDTTFPRY 480
  481 VNLAVIGNVL AHEIGHAFDH TGINYDDAGQ QRIWLTPEDS EEYGKRLRCL LRQHDEYDDP 540
  541 DFGRNLNGSK TLHEISADRF GVEAAWRTFK KLDLSNESEI VGFQNFNIDQ LYFRTAALIW 600
  601 CRQRDTTDLQ YALQREHPTN NFRVNGIYAN MPQFAETFNC PLGSPMNPKK KCDLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle