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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE29212
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRKNEPTW VTKPLLKRSH SSDSSIDEST VKLTNYGIFY YTQGVDLLLL ITGTVAAVIH  60
   61 GAGFPLLAIV LGGMTTVFLR AQNSDFVVGV DNVNPEGLVP ISLDEFNSEV VKYCIYYLVL 120
  121 GVLMFFTSYV QIACFESYAE RLVHKLRQNY LKAILRQQIQ WFDKQQTGNL TARLTDDLER 180
  181 VREGLGDKFA LLVQMFAAFL AGYGVGFFYS WSMTLVMMGF APLIVLSGAK MSKSMATRTR 240
  241 VEQETYAVAG AIAEETFSSI RTVHSLNGHK RELDRFYNAL EVGRQTGIVK YCYMGIGVGF 300
  301 SNLCMYSSYA LAFWYGSTLI INDPTFDRGL IFTVFFAVLS GSTSLGGALP HLASFGTARG 360
  361 AASTVLRVIN SHPKIDPYSL EGILVDNMKG DISFKDVHFR YPSRKDIHVL KGISLELKAG 420
  421 DKIALVGSSG CGKSTIVNLL QRFYDPTKGR VLIDGVDLRE VNVHSLREQI GIVSQEPVLF 480
  481 DGTIYENIKM GNEHATHDQV VEACKMANAN DFIKRLPDGY GTRVGEKGVQ LSGGQKQRIA 540
  541 IARALVKNPK ILLLDEATSA LDTEAEREVQ GALDQAQAGR TTIIVAHRLS TIRNVDRIFV 600
  601 FKAGNIVESG SHEELMSKQG IFYDMTQAQV VRQQQQEAGK DIEDTISESA HSHLSRKSST 660
  661 RSAISIATSI HQLAEEVEEC KAPPTSMFKI FKFNGDKVGW FIGGIFGAFI FGSVTPVFAL 720
  721 VYAEIFNVYS LPADQMQANV YFWCGMFVLM GITFFVGFFT SANCLGRCGE SLTMKLRFEA 780
  781 FKNLLRQDIA FYDDLRHGTG KLCTRFATDA PNVRYVFTRL PVVLASIVTI CGALGIGFYY 840
  841 GWQLALILVV MVPLLVMGGY FEMQMRFGKQ IRDTQLLEEA GKVASQAVEH IRTVHSLNRQ 900
  901 EQFHFTYCEY LREPFNTNLK HAHTYGAVFA FSQSLIFFMY AAAFYLGSIF VNQQAMQPID 960
  961 VYRVFFAISF CGQMIGNTTS FIPDVVKARL AASLLFYLIE HPTPIDSLSD SGIVKPITGN1020
 1021 ISIRNVFFNY PTRKDTKVLQ GFTLDIKAGK TVALVGHSGC GKSTIMGLLE RFYNQDKGMI1080
 1081 MIDGDNIRNL NISSLREQVC IVSQEPTLFD CTIGENICYG TNRNVTYQEI VEAAKMANIH1140
 1141 NFILGLPDGY DTHVGEKGTQ LSGGQKQRIA IARALVRSPS VLLLDEATSA LDTESEKIVQ1200
 1201 EALDAAKQGR TCLVIAHRLS TIQNSDVIAI VSEGKIVEKG THDELIRKSE IYQKFCETQR1260
 1261 IVESQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle