YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE29179
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNIVPRILG FVLFVLGAAI FLTEVMHSYH RFVKQSEEYS ISNSNTDDAP TKKKQMKAFF  60
   61 SLYHNMDELK AQNSDVVQPR VLKGTAREFC NNTDHCIRPF LNHETRYRVA PDYKMAHCVV 120
  121 HKSMSTVITG IWCYLFNRNR FVRVDKQMNM SEWDKESLCR GDNTFRHLKS LQKKYNASEM 180
  181 TGWSLSMITR DPIDRFISGY VDRCIRVAEG PSPCNGCDKN MTCFILSEYE RFKKQAHKGV 240
  241 LTNTFEDRHF YPQNWRCDIK TMRNKYEFIR YSSDASKELM EDLFKIARRQ GIPEKELEYI 300
  301 ENELTKNRKT SHTTAYSPAR EFFQRRLRES PLLMEYVVRM FYHDFVILNY PLPEGF

Type	Start	End	Confidence
Cytoplasmic	1	7	0.56
Transmembrane Helix	8	29	0.59
Non-Cytoplasmic	30	356	0.94