YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE29152
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	58	0.78
Transmembrane Helix	59	81	0.90
Non-Cytoplasmic	82	87	0.72
Transmembrane Helix	88	107	0.94
Cytoplasmic	108	129	0.61
Transmembrane Helix	130	153	0.68
Non-Cytoplasmic	154	171	0.64
Transmembrane Helix	172	192	0.83
Cytoplasmic	193	198	0.72
Transmembrane Helix	199	222	0.82
Non-Cytoplasmic	223	255	0.82
Transmembrane Helix	256	279	0.81
Cytoplasmic	280	283	0.81
Transmembrane Helix	284	302	0.87
Non-Cytoplasmic	303	307	0.84
Transmembrane Helix	308	329	0.94
Cytoplasmic	330	338	0.82
Transmembrane Helix	339	362	0.92
Non-Cytoplasmic	363	492	0.93

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGTEWIVII VTIIHIILAP GTKVEESFNV QATHDLMFHL PTNLSNYDHS QFPGVVPRTF  60
   61 IGPISLAILS SPMSFIFRFW AIPKMWQLLL IRATLGLMNA MAFLYFARSV NRKFGRETAM 120
  121 YLRLIMCTQF HYIFYMSRPL PNTFALILVM IVFERLLEGR YESAVRYATA SVILFRCELV 180
  181 LLYGPIFLGY MISGRLKVFG FDGAIAIGVR IAAMCLAVSI PIDSYFWGRP LWPEGEVMFF 240
  241 NVVENRSHEY GTQPFLWYFY SALPRCLLTT TLLVPLGLLV DRRLPQIVLP SVIFIFLYSF 300
  301 LPHKELRFII YVLPIFCLSA AVFCARMLIN RHKSFFRMIL FFGVILHLLA NVLCTGMFLL 360
  361 VASKNYPGFD ALNYLQFQNR FDAKKPVTVY IDNACAQTGV NRFLHINDAW TYNKTENLKP 420
  421 ADLENFDFLV LGTYGNTLKT EVESKFVTWH RPLFFVNSFH QYKIKKSRQF PWIYPEIIYT 480
  481 EKAVVLKNRN YK