YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE29133
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRQGAGTLQ LVSQGFANAE QARGFATLKD ISIRLKSVKN IQKITKSMKM VAAAKYAKAE  60
   61 RELKGARAYG VGAKTFFDNI DPVVEGVEKQ ESKKQVLVLI TSDRGLCGGV HSSIVKEAKN 120
  121 ILNNAGDKEI RVVAIGDKSR AGLQRLYANS ILLSGNEIGR APPSFADASI AAKAILDSGY 180
  181 DFETGTILFN RFKTVVSYET SKLQILPLEA IKAKEALSTY DSVDDDVLQS YSEYSLAQLI 240
  241 YYGMKESATS ELPASKYLSL SVPFLHPLLF KLSLFRRPNF PHFKSFLSPP KIRCFDLFFI 300
  301 FLCVTRCYSD TFE

Type	Start	End	Confidence
Signal Peptide	1	19	0.87
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	313	0.98