YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE29075
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICLEALQTW YQSVYLGSAY FYMKTESFVY LSLVYIQFSL FFLTSILIVI YFISYNGVQR  60
   61 LNVITITTNF IKMVVDVSCF GTIYFVGSSK ILPIVDLAYF NCVIQPCRFL IFIVYCHHGA 120
  121 RCDAYHRFLV EYEEFELEK

Type	Start	End	Confidence
Cytoplasmic	1	30	0.51
Transmembrane Helix	31	55	0.87
Non-Cytoplasmic	56	67	0.45
Transmembrane Helix	68	87	0.58
Cytoplasmic	88	139	0.48