YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE29031
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLINSSRLSI SSTGRCLLAS AMSQMDEVFG VQKRQMGRRQ PKQGKPPILP PSKKVLYHVV  60
   61 HAPWQKPEDV EELLWRRHAY NNAVISLREV FRAELAQNAS HGQGIEAMKE AEALELDELI 120
  121 AQNEKRNEEK RAARKEREAE DAKETKSVIL EEIRVELEKR NAGKKQAEDE VKNAISRSSE 180
  181 FITRSNLETK ILEALEKPTI YDFAIDRAGN KYFVPEPVKY QEGTPTRQKG RLYDQTLGTQ 240
  241 HGTIEEANKI QQKSV

Type	Start	End	Confidence
Signal Peptide	1	23	0.94
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	255	0.99