YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE28937
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHNSMDMDM NQGPFMWMWF HTKPQDTVLF STWNITSAGK MVWACILVAI AGIILEAIKY  60
   61 NRRLIQKRQS PSKKESYISR LLSTMHFFQT FLFFVQLGFS YCLMLIFMTF SIWLGLAVVI 120
  121 GLSIGFLIFG GRSE

Type	Start	End	Confidence
Non-Cytoplasmic	1	38	0.90
Transmembrane Helix	39	58	0.94
Cytoplasmic	59	76	0.92
Transmembrane Helix	77	99	0.84
Non-Cytoplasmic	100	108	0.61
Transmembrane Helix	109	130	0.92
Cytoplasmic	131	134	0.85