YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	cdk-4
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIRHILAIR KKSLELPSDL KTFLRVLANC QHLKKNKKCR RTIFSVDFQN NQRQKPSNFH  60
   61 FWTVIKKFSK KILKSFIIKF GNNGTIAVVF SIFPTGATPS LTFLFQALGK GAYGNVYRVR 120
  121 SLHDGKDYAL KQIMISSKNE GIPQSVLREI TVMKHLARKA HPNIISLKSV FHQLDPVRAI 180
  181 LKINMIMERC DWDLHTFLRN IPRGVPEQQA KHVTAQIVRA LDFLHTHSII HRDLKPQNIL 240
  241 LNRDQTVKLA DFGLSKEYSN TTAFTTLVVT LWYRSPEVLL QSYYNSTVDM WALGCIVSEI 300
  301 YCRQPLFVGQ NEAEQLTDIF KKMGTPVGKD WPSESVIARD SFPQYRPTNL KDLSPQMSKQ 360
  361 AIEFVQQCLR YDHSKRLSAR GALSHPFLKP AVATKSRVLK QINFNK

Type	Start	End	Confidence
Cytoplasmic	1	75	0.81
Transmembrane Helix	76	97	0.76
Non-Cytoplasmic	98	406	0.99