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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tol-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRKMKLFLF LLLVINICRS AAANGDECPK FCKCAPDPVQ PTSKLLLCDY SSKNTTITPI  60
   61 ASSNYDQVAN IRSLFISCDN NNFQFPDAYF KSLTALHHLR IVGCETTHFS VKLFEDLAAL 120
  121 RRLELDQIST ASTSFEMTED VLMPLARLEK FSLTRSRNIE LPQRLLCSLP HLQVLNISSN 180
  181 ELPSLRREES CVAQQLLIVD LSRNRLTNIE QFLRGIPAIR QISVAYNSIA ELDLSLATPF 240
  241 LQQLDAEANR IVDLTSLPGT VVHVNLAGNA LKRVPDAVAE LASLVALNVS RNEIEAGNSS 300
  301 VFSSPELEML DASYNKLDSL PVEWLQKCEK RIAHLHLEHN SIEQLTGGVL ANATNLQTLD 360
  361 LSSNQLRVFR DEVLPENSKI GNLRLSNNSL ELLEPSSLSG LKLESLDLSH NKLTEVPAAI 420
  421 GKVEQLKKVD LSHNRIAKVY QYVLNKIKQL HTVDLSNNQL QSIGPYIFSD SSELHSLDVS 480
  481 NNEISLLFKD AFARCPKLRK ISMKMNKIKS LDEGLTEASG LRRLDVSHNE ILVLKWSALP 540
  541 ENLEILNADN NDINLLTAAS MSPSTANLKS VSLSNNGITI MNADQIPNSL ESLDVSNNRL 600
  601 AKLGKTALAA KSQLRRLNLK GNLLTVVATE SMKVVEAVHP LKVEISENPL ICDCQMGWMI 660
  661 GGAKPKVLIQ DSETASCSHA VDGHQIQIQS LSKKDLLCPY KSVCEPECIC CQYGNCDCKS 720
  721 VCPANCRCFR DDQFNINIVR CHGNSSMVPK REFVVSELPV SATEIILSGV TLPQLRTHSF 780
  781 IGRLRLQRLH INGTGLRSIQ PKAFHTLPAL KTLDLSDNSL ISLSGEEFLK CGEVSQLFLN 840
  841 GNRFSTLSRG IFEKLPNLKY LTLHNNSLED IPQVLHSTAL SKISLSSNPL RCDCSGGSQQ 900
  901 HLHHRRDPKA HPFWEHNAAE WFSLHRHLVV DFPKVECWEN VTKAFLTNDT TVLSAYPPNM 960
  961 GNDVFVMPIE EFLRDYNSTI CVPFSSGFFG QDPQNSILFV IITISIAVLL CVLVILAISF1020
 1021 IRKSHDAINQ RRYKASSLNC STSAGSSPLP VPLLSYHAFV SYSKKDEKMV IDQLCRPLED1080
 1081 EDYQLCLLHR DGPTYCSNLH AISDELIAQM DSSQCLILVL TKHFLENEWK TLQIKTSHQL1140
 1141 FAKNRAKRVI AVLGDGVDAN LLDDELGQIL RKHTRIEMRS HLFWTLLHSS LPSRLPLPSN1200
 1201 SGDDSSQLYS DIYGIVPSDV V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle