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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE28677
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRDLGRVHI VSFAVGIVGL AVGITGIVLA IVFGTAQSTC TTPSPPPVCP TCPTQTAQCN  60
   61 TNLFSISTQV NNLKWNDDYN NTNSPAYIDA VKNITSALTA TLNTGLNTAS SSGFYRVLAV 120
  121 STTNNVNVQI SALRQGSDNS VVAIGNGAIS STSDLGQMPT DKNVNSVITS DNTTYSDVTT 180
  181 APQACDKTII QSDCPSTVAP VTCSTMPMPT TQPLVTSTAP EVTTTVAQTT TAPIVTTANT 240
  241 TTQGVTTTAG VTTTVTRAQN STLAATTTAP STNTTTQGVT TTVGKTTTVT TAQNSTWAAT 300
  301 TTASNTTTQP VVTTSTSTQG ISTTTAQATP SSSVIPTTTQ TTQRPTSTGI PSTVSTSQGT 360
  361 SSTSPIPSTT QTSSSAPSTY TSNFTPSPTT TLLTSTIAPS TQGVPTSSKS SSPNSTPTTT 420
  421 ITPGAPSSTL GSSSSTIVST TITPSTPKVS TLTLSQSPTP TSTPLVVSSS SSGSSSTVVT 480
  481 STITPSTQGV PTSTSNQPTP STSNPTTPKS TVTASPSTTG ATSTASPSTI TSSAPTSQSH 540
  541 SPSSTMTSTV PVTSTFASTT TTVPITVAPG QCYCQSNVAV AFELTSGTSD LDLDIQNFIA 600
  601 NYLFFYSGAP YILGDLTDNR TAISLVPFPN DDTLSDLMTY GAEQTPSGIS AALDTFNILA 660
  661 RGNAVISDAF NIIPNITRKG YQGFVILVAN SDESVQASVD SATNLKAQGF NVITVAFKSS 720
  721 GKFDVLASQP SYNYTIVQDA DKRYVATLIG NVLNTTYCNN LAASSTTMTS GVYSSTVTVT 780
  781 TQGSSSQAPS STVTVPTTGT TSGAASTTGS ITSTQQATST SSVITTGSTS APQSSTAVSS 840
  841 TTTSPSTTTG STPAPQSSTV ASTTTVSPYT TTECICTTVS NTFGTSTTQG LTSSSAQSTA 900
  901 STGVSTVASS TTIPQGSSSS SPQSPTSAQP AQSSSTSAAT VTVSSSQSPT SSPAQQSSTP 960
  961 AGSSTVTVQQ SSSFQSPQST TQIGSSTTVP STQAPSSTSG GPTTTQICPN QQTVFKGQVG1020
 1021 VIYEMLPAST QQNAINAFVE NVLLNSNFYG LALDNLTHDN RTLVTAIPYP TTDKYNVQGY1080
 1081 GSARSVDEFR NQVIAFNGMI QPISQSSSIS DALLYVTTSL PAGGVKSSLI IVGNSAAMID1140
 1141 NIAPILTNQL RSDFDIYTVG VGSGAVDLSP LSSGTGFSFT GDTQQVADQI GLKMASSNPS1200
 1201 VYCPPPVPST AAPSTSTAVP TTTVPVTTTI ATTTRVTTVR PTVGPCQCTG RWVYNGDLAI1260
 1261 AFENIKTNGS QSVANFLSNT LLKNPDSYGL TNDVNGNQPS QLTLIPYPDS NTYPTYPYGW1320
 1321 IRSVNDIGNY IDAISPLPLA TPDPQISDAL TFISAQPTTL NSKVVLLVGS NGTDVNAAMD1380
 1381 SANKLKNAGY LVITVAQTAA ASVFQPLASG SQFALHIGDG NDDAVAAQIA SMLLDYSFTC1440
 1441 FDDGSSTPSP TTRCPGTQGT TQPGTIGTTV TVPPSSSSIG STAPQGSSSI QPIASSSTMG1500
 1501 STAGSSSPQP TVSSTSVPSS TGATSSGSST TVGSSTVGAT QTSVSSSTVP NTGSTGSTVT1560
 1561 NPSTSSSTSG SSSTQSIPSS TAANTGSSTS GPTVATTQGS SSTQTNSNTG STTVATTVTQ1620
 1621 GSSTGGNSGS TTVNFQSSSV ASTVASSTAN IESSTTPIPT CASPYSGKIA TVFELNANSA1680
 1681 TNIVNFVSNN LYNSANYDFT NSTEAINVPY GQTDHYATQI LQYNGTKSLS NLQDNVSDLL1740
 1741 TSAILLIDAT ISDGLQWLQT NRDPAGTNAV IIVVGNDDDE NPAMTTFTLR DLRAQGYKVI1800
 1801 SVAVGEGHGD FSPIPDKPEW YFQVNDSNGQ NIADQISSIL CNLK

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