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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: wht-2
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATETCSLLS VGQSEYGAAA SMISALEAVD PVTLTWHNIS IHAEKSGKQI LENVSGIAKP  60
   61 GQLLALMGAS GAGKTTLLNM LLSRNLRGLE TSGSVKVNGH ELGRGITAIS GYAQQDELFV 120
  121 GTLTVKEYLD IQAKLRVNGD SEKRRRRVGN VMSQLGLYKC QNTRIGTIGG QKGISGGEMR 180
  181 RLTFACELLS NPSILFCDEP TTGLDSFMAE SVVQVLSNLA KSGRTVICTI HQPSSQLYLM 240
  241 FDRVMFMAGG KTAFLGSPRD AIQFFEDAGF ACPRNFNPAD LIIHTLAVMP NEEDKCRQRI 300
  301 EVIYTKFQNS SYGRTLKFGV EKSDEGQRPS ERHKTGILTQ IGALLERSAI DTWRNPSLTR 360
  361 AKVIQKSIMG LFIGLLYLQS PLTSIGISNL NGALFYLVCE LTYSTIFGIL NFLPADFPLV 420
  421 SREYHDGLYS VFSYYVARCL SYLPLFTADG LIMLLVSYWM VGFSSSITQV LYACLIAFLI 480
  481 EQSSSACGIM ISCISPSLPI AMSTAGPMLT LLSLTGGLYA NVGALPSYIS WIQYLSWFRY 540
  541 GFEAFAINQW SSVNEQNTTI WTDEKRDSVL SQLSFRAEMF YPDLFIMSAF ILIFYTIGYA 600
  601 GLALRVSKAR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle