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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: aman-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLQVIFLFL GLLVIYSSQD CAWNTCHKVD QDPNVITAHL IPHTHDDLGW IKTVDQYFWG  60
   61 AKPELVPVGV QYIYNTVIDE LLKNPDRRFS FAETGFLWRW YTSNSDFDRH QLQKLVKNGQ 120
  121 IEIIGGGWVQ NDEATSHYVD IIDQMTLGLQ RLEQIFGECG KPVTGWQIDP FGHSREMANI 180
  181 YREMGYSSVY FARIHYLEKQ IRLKNKTLEF MWNTSDDITD NKLFTGAFFN DNYGPPEGFC 240
  241 WDSLCGDDPI MDNLNIEGYN VKEKVDAFVD HVKNQAAHQS TNQVMLLMGS DFQYTNANSW 300
  301 YVNLDKLIKY VNADTSKKVR VIYSTPACYT KAVQAKTPTL SVKHDDFFPY ASGRHSYWTG 360
  361 YFTSRPAFKG MIRQASCMLQ LAKQLDVIAN LGPEDDSDIE ILREASALVQ HHDAVTGTAK 420
  421 ENVTRDYEKQ LAKGVSEVEV VINDFMKKMN PDGLDPKLVL CPLINETICK PINGSSEFSV 480
  481 VIFNSNGRYF NGTIRIPYSQ KTAVLRDAHK NVLESQIVET FQIDQLKDTD RLPYEIHVFV 540
  541 RVPPLGYTTV FVEKGSKPER VHFNNRKKFN TNVEIQNEYL IAGFDSQGYL SYITEKATKK 600
  601 KRSIRQEFFY YEGIDSKDDQ PSGAYIFRPK TQQPIALTSK LALEVVPGAI INEVRQKVSP 660
  661 FVSQQIRLPR GKNYIEFEWI VGPIPKETKN PITKEFVTRY TTEVHSKNQS FTDSNGRQAM 720
  721 ERFFDGATSF EYSDTEPIAG NYYPITSFGY IKDENAQFSV ITDRAQGMVA SDGVVEIMLH 780
  781 RRCFYDDHFG VEEALDEPGK DGAGLVAMGK HIVLFTDVKA STSQLRPLAI DNFHQPVLAF 840
  841 NKNPEKFEFN RLLEYSGLKF ELPIGIHLLT LEKWHKKSSL IRFENIYHGE EGNSIKEFDP 900
  901 THIFTNFDIV SFKELLLGAN RVVGKNKESG SSFRSFEKSK ILTFEIEVER KMSKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle