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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE28415
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVYSLLLLI LYDFLPKVVT FDTVCIGLCH CVGNVVDCSS LDLSEIPTTI PNNTRILLLS  60
   61 DNEIESIDKS RLKGFYFLQT LDISNNIIRH IDFEFFYNLP NLKILNIRKN RLARIPRGSH 120
  121 ELGHLEKLDL RSNLISTVTS EELSYLAAVR SVDLSRNLIS YLPKPTTSAK VNIEKLDLAS 180
  181 NSITDIGTDH FSSFNTLVTL KLARNHITTL NQFSFSRLRK LESLDLTRNM IREVRFLAFN 240
  241 QLPSLQNVSL ARNDVYRLDD GMFYACEGLK HLNLSTNRVQ AVTEGWMFGL TSLEVLDLSY 300
  301 NQIQSFHISS WSHTPKLKWL SLHSNRIQSL PSGSFRVLRQ LEELILSANS IDSLHKFALV 360
  361 GMSSLHKLDL SSNTLAVCVE DGAVLYNTSM PFLRSLRFTN NQLRVIPKRA FERFPALEEL 420
  421 DLTDNPIATI HPEAFEPLEL KRLVMNSSSI LCDCQISWLA SWIYRLKLDK SSIIAKCSYP 480
  481 PPLADLYVVA IDTANLTCHN DSPRAKIVRQ PVEVSTLIGE KARFTCNVYG ASPLSIEWRV 540
  541 MENGQPRVLV QDSATFLSIN RTAVVNGTFD ERELAAAELL LDNVAMTDNS EYQCVARNRF 600
  601 GSDFSTHVKL QVYQAPKFTY TPEDMPLLVG QTAKFLCAAT GTPRPEIKWA FEQIPFPAAE 660
  661 ARRLYVTPND DHIYIMNVTK EDQGAYTCHA TNVAGQTQAS ANLIVFENFF HYPESPDLSP 720
  721 MLIKKRDALK IDCSCDLISS RQRMVWKRQQ QVILFLKKAK FSDNDQILTL TQTTFSDSGE 780
  781 YSCELWVDDT ILMRKITMVK VVNEDEFVSS EATLTQRVQR IRAMASKLVD NIKSTGNGIY 840
  841 LMASCSAFGL MILGVITSIC ICIAKCSCNQ NHVFNVLPVQ V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle