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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mes-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHHFLTLL CTFLPLTTTA LTNSTPLSLL GPCYKRCVTK FGETKEQLTN AETISLEYDV  60
   61 SNNTEFSLCK LGCNSHEYTD LNLAAFRYGQ LAYQKILTTV EDVPTRGTVL NDVFIVCLDT 120
  121 SFMPSNNSAP SAKRLLSGTV LLVLDEDVAK ADNVFLIEVL ARNADKSAVQ VISQQWCYSS 180
  181 NCNITFNAPT EVSSFDVRLR VSTFDSNGQV GGINFSKWHN INQILTKTFV DMSLKSVVWK 240
  241 AEKAAANFVF NLTASDHVPA CSLQMIYRSS LSSELLHRNF YLDHTLEVFV NNLDFDKIYT 300
  301 MQLAPSGTHD RSTPSLASAV IEIPPCRHLV DDYSMCAPPP VSSLSYNWNL SPTSEYELLI 360
  361 KWKLLNYMDG LNVTEELSIP VAYFLLNAHP LITANNEQCE KYEKIRRVVS YGLRELVFHV 420
  421 PDTDCNYEVE MTAVDTNQRI SEVKKIQVFR FNVPPYVSFL QASDIPTSVE LMAVVLATSA 480
  481 IFALIALFLL YRKRKRDKKA RFQMYKDAEA GVSYDYVATT ESLGSVVQIR STNFRFEPVE 540
  541 NIDGNIEAAL AQQQKFEGGT MNSMFRTYYN LDHPVKVPAH MAEASSDEDN GYENIRYSYF 600
  601 GSELSDDVFE EDIYMTHKSL SIYCQDSPLT TPMAPIAPYE HFDDIPSHQY RNFQVHNFNE 660
  661 RIEKQAYWLM ATVVDVVRRE LYSLKVPKDY TPETISAMRK ELEFLRTLAP HGNCRRFEGV 720
  721 VIGRWDDLPR QVIGILIENT RGGTLRNYIA AVGSVFRNCS LATDHDSFAS QQDMNSTQHP 780
  781 FDKLSTEADE NNSKKVKIQE ITDSLSIRFC QFAEQVSSAL EHLHSAGSVH TRVTTLNIYL 840
  841 LHNYSDPFDM LPDQVVKLGN FGFAVQNSED VVLDDNLQPP EVIKGEKYEA RGDIWQFGLC 900
  901 LAEMCSLGDL EQSEVGTLKS GHDTFKNLPS TQVLRDAAKR CLSARTRPSA SDLCGVFKSV 960
  961 NVAATV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle