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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ddr-2
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNRKIRDEQ ISASSSFDLQ STGPQHARAH QESGSGAWCP KNQINSLSKE WLQISFSVDT  60
   61 VITSVETQGR FDDGRGMEYA TAFKIQYWRP SLNAWASYKD DFELETIPAN NDTEHAIRRH 120
  121 LDRAIIARRI RIVPVSNSTR TVCMRVEVFG CPFDDSLVFY NVDQGDLQSG ISYHDFSYDG 180
  181 NLANSPHLTG GIGKLYDGEV GKNNVFVNHH KWVGWRRKRN GNVKLAFEFS ELRNISGILI 240
  241 HTSNEFKKSA KAFSSATVLF SINGKDFSDT IVHFNNPEDT ESEVPRWIRI PVNNRIAKVA 300
  301 KIRLNFGTDS DWLFISEVNF ESNHTNIELL NDDVVIPDSV SYFSVTEHDD GTSMFAFIIF 360
  361 FFMFLIVAVI ILTVLYRKRE YRVKASSPSP NAKREILLTI DGNTIKHHVS PSTYQMARDN 420
  421 LQNALIEKMP MSPIISDYAE PDISVCSDVT ANTPLLYGID GPYDTQKRSN PLSSMVKYSD 480
  481 YGEVYCTTLP EIARDKLICV SRIGQGEFGE VDLCQLENRK VAVKKLHGIS QADEFSFHRE 540
  541 IRVLGSLKHP NVVEVVGVCT IQKPILCIME YMENGDLKSY ILKNPTIQTS QCISICTQLA 600
  601 AGLAYLESCN FVHRDIAARN CLVDGEGNVK IADFGMARSL YSQEYYKVEG KFVLPIRWMA 660
  661 WEALLLGKFS TASDVWGFGV TMWEIFSLCS EKPYSDMTDD DVVENLQSMS STGSLKQVLS 720
  721 RPRMCPSKLY NEQILPCWNY ESSRRPSFEN VHLHLQSLVH TSPHIHF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle