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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ddr-2
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLLYLFGV TFHSNTVVAL ELRECSHQLG MSNRKIRDEQ ISASSSFDLQ STGPQHARAH  60
   61 QESGSGAWCP KNQINSLSKE WLQISFSVDT VITSVETQGR FDDGRGMEYA TAFKIQYWRP 120
  121 SLNAWASYKD DFELETIPAN NDTEHAIRRH LDRAIIARRI RIVPVSNSTR TVCMRVEVFG 180
  181 CPFDDSLVFY NVDQGDLQSG ISYHDFSYDG NLANSPHLTG GIGKLYDGEV GKNNVFVNHH 240
  241 KWVGWRRKRN GNVKLAFEFS ELRNISGILI HTSNEFKKSA KAFSSATVLF SINGKDFSDT 300
  301 IVHFNNPEDT ESEVPRWIRI PVNNRIAKVA KIRLNFGTDS DWLFISEVNF ESNHTNIELL 360
  361 NDDVVIPDSV SYFSVTEHDD GTSMFAFIIF FFMFLIVAVI ILTVLYRKRE YRVKASSPSP 420
  421 NAKREILLTI DGNTIKHHVS PSTYQMARDN LQNALIEKMP MSPIISDYAE PDISVCSDVT 480
  481 ANTPLLYGID GPYDTQKRSN PLSSMVKYSD YGEVYCTTLP EIARDKLICV SRIGQGEFGE 540
  541 VDLCQLENRK VAVKKLHGIS QADEFSFHRE IRVLGSLKHP NVVEVVGVCT IQKPILCIME 600
  601 YMENGDLKSY ILKNPTIQTS QCISICTQLA AGLAYLESCN FVHRDIAARN CLVDGEGNVK 660
  661 IADFGMARSL YSQEYYKVEG KFVLPIRWMA WEALLLGKFS TASDVWGFGV TMWEIFSLCS 720
  721 EKPYSDMTDD DVVENLQSMS STGSLKQVLS RPRMCPSKLY NEQILPCWNY ESSRRPSFEN 780
  781 VHLHLQSLVH TSPHIHF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle