YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	unc-46
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.73
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLFYFLLIS SFTDALTTST AITSTGIESS FVHENQTIGL KKENGDTCIS VTFQVKILNQ  60
   61 QNNNSVPIDF HLPSGLIKGN CAVTRKSKAV ISSTIEETDG RMKTLKFVFR TEEMRAKRLD 120
  121 ELRWQLNKVI YEEKFAGSSA VFESDNSSVI FSAPLTQKYV CEDRINVTLH SVNFDFPILV 180
  181 MFSPEIDVQP YGPKSNFYIC ERSRKRTLSE SLQHRSTVFC GVVLALSSIA HIVGHMLRRH 240
  241 FMPHRKELYE NLDKLPAMN

Type	Start	End	Confidence
Signal Peptide	1	21	0.74
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	215	0.92
Transmembrane Helix	216	237	0.87
Cytoplasmic	238	259	0.87