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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pgl-3
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPVPTCLLL AWTFALFSGM TSLRPKFDSG AEKLSQLGQA HDLAPIIDDE KKISMLARKT  60
   61 KLKKSNDAKI LQVLLKVLGA EEAEEKFVEL SELSSALDLD FDVYVLAKLL GFASEELQEE 120
  121 IEIIRDNVTD AFEACKPLLK KLMIEGPKID SVDPFTQLLL TPQEESIEKA VSHIVARFEE 180
  181 ASAVEDDESL VLKSQLGYQL IFLVVRSLAD GKRDASRTIQ SLMPSSVRAE VFPGLQRSVF 240
  241 KSAVFLASHI IQVFLGSMKS FEDWAFVGLA EDLESTWRRR AIAELLKKFR ISVLEQCFSQ 300
  301 PIPLLPQSEL NNETVIENVN NALQFALWIT EFYGSESEKK SLNQLQFLSP KSKNLLVDSF 360
  361 KKFAQGLDSK DHVNRIIESL EKSSSSEPSA TAKQTTTSNG PTTVSTAAQV VTVEKMPFSR 420
  421 QTIPCEGTDL ANVLNSAKII GESVTVAAHD VIPEKLNAEK NDNTPSTASP VQFSSDGWDS 480
  481 PTKSVALPPK ISTLEEEQEE DTTITKVSPQ PQERTGTAWG SGDATPVPLA TPVNEYKVSG 540
  541 FGAAPVASGF GQFASSNGTS GRGSYGGGRG GDRGGRGAYG GDRGRGGSGD GSRGYRGGDR 600
  601 GGRGSYGEGS RGYQGGRAGF FGGSRGGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle