YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE27218
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLRNLFPIF IYIIFVLLFL ALSLFLLYIW RRILTNSSNS DLGGSEEDVE RSLLTTSLPI  60
   61 SNKYDLDRTR IQTESELISE TIKSLIGDNH LEIDPENLKI STENYIGSGF FGTVYRAELR 120
  121 RERRNSNFMI VAVKEPSNIH NIRQKKILHE ELNVMCSMEK HPNILSLVGV VTQRNVMIVT 180
  181 EYVEDGDLLK FLRKCKFDKD SVKLDEKSLC KADLFSFTFQ IANGMQYLER VPCVHRDLAL 240
  241 RNVLIKNNGV LKIADFGLAR RHDKKDYYRT KTTDTALPIK WLAPECFEEE EEKIRFDSKS 300
  301 DVWSYGVCLY EIFSLGESPY NELDSNNFAF LQVLADFLRK GNTLSEPEHC APKMYYFMKS 360
  361 CWNLIPEERP SFTACTNFSR TQLNQLSNEV QLFEPIE

Type	Start	End	Confidence
Cytoplasmic	1	8	0.87
Transmembrane Helix	9	30	0.96
Non-Cytoplasmic	31	397	0.95