YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE27044
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYCQRLALPL TRSLLASRAP LALRMENAVA ARMISTTVAR KDIDSAAKYI GAGAATVGVA  60
   61 GSGAGIGNVF GALVIGYARN PSLKQQLFSY AILGFALSEA MGLFCLTMGF MILFAL

Type	Start	End	Confidence
Cytoplasmic	1	48	0.70
Transmembrane Helix	49	75	0.80
Non-Cytoplasmic	76	89	0.60
Transmembrane Helix	90	114	0.89
Cytoplasmic	115	116	0.59