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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: vit-4
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSIIIASLV ALAIAASPAL DRTFSPKSEY VYKFDGLLLS GLPTTFSDAS QTLISCRTRL  60
   61 QAVDDRYIHL QLIDIQYSAS HIPQSEQWPK IESLEQRELS DELKELLELP FRAQIRNGLV 120
  121 SEIQFSSEDA EWSKNAKRSI LNLFSLRKSA PVDEMSQDQK DMESDKDSLF FNVHEKTMEG 180
  181 DCEVAYTIVQ EGGKTIYTKS VNFDKCITRP ETAYGLRFGS ECKECEKEGQ FVQPQTVYTY 240
  241 TFKNEKLQES EVNSIYTLNV NGQEVVKSET RAKVTFVEES KINREIKKVS GPKEEIVYSM 300
  301 ENEKLIEQFY KQGDKAEVNP FKAIEIEQKV EQLEEIFRQI QEHEQNTPET VHLIARAVRM 360
  361 FRMCTIEELK KVHTTIYTKA EKKVQLVIET TLAVAGTKNT IQHLIHHFEK KSITPLRAAE 420
  421 LLKSVQETLY PSEHIADLLI QLAQSPLSEK YEPLRQSAWL AAGSVVRGFA SKTQDLPLIR 480
  481 PASRQTKEKY VRVFMQHFRN ADSTYEKVLA LKTLGNAGID LSVYELVQLI QDPRQPLSIR 540
  541 TEAVDALRLL KDVMPRKIQK VLLPVYKNRQ NKPELRMAAL WRMMHTIPEE PVLAHIVSQM 600
  601 ENESNQHVAA FTYNVLRQFS KSTNPCYQQL AVRCSKVLLF TRYQPQEQML STYSQLPLFN 660
  661 SEWLSGVQFD FATIFEKNAF LPKEVQASFE TVFGGNWNKY FAQVGFSQQN FEQVILKTLE 720
  721 KLSLYGKQSD ELRSRRVQSG IQMLQEIVKK MNIRPRVQQT DSQNAHAVFY LRYKEMDYIV 780
  781 LPIDMETIDN VVEKYVRNGE FDIKSLLTFL TNDSKFELHR ALFFYEAERR IPTTIGMPLT 840
  841 ISGKMPTILS INGKVSIELE KLGARLVLDI VPTVATTHVT EMRFWYPVIE QGVKSLQSAR 900
  901 LHTPLRFEST VELKKNTLEI THKFVVPENK KTTVSVHTRP VAFIRVPKNQ DSEYVEAEEK 960
  961 TISHSQYQMS TEEIDRQYET FGLRINAQGN VLSQWTLPMV LMTEQDFEFT LENKNRPVEF1020
 1021 TARVTIGNLE KTDLSEIKFD KIFEKEFDLE NNESENRRQY FHKMIREIQS EQGFKNLITL1080
 1081 KLEAPQQMYW NTELRTVCDK WIRMCKVEMD ARRSPIEHEN KEWTLRTELL AARPQMPSSL1140
 1141 RQLREQPHRE VQLALNAKWG SSKKSEITFN AQLEQSTEQK KFLRNIEREY KGIPEYELLI1200
 1201 KAARLNQVNV VSEYKLTPES EYTFSRIFDL IKAYNFWTVS EKRVQNEDRR VVLQLSVEPL1260
 1261 SRQYMNMTIQ TPEQEVELKN VRIPRVVLPT IARRAMFQQT WEKTGATCKV DQSEVSTFDN1320
 1321 VIYRAPLTTC YSLVAKDCSE QPRFAVLAKK INKNSEELLV KVVRREEEIV VKKSDDKFLV1380
 1381 KVDGKKVNPT ELEQYNIEIL GDNLIVIRLP HGEVRFDGYT VKTNMPSVAS QNQLCGLCGN1440
 1441 NDGERDNEFM TADNYETEDV EEFHRSYLLK NEECEVEKDR ISEKKNYKNK WNREEKKSDY1500
 1501 ESSSDYESNY DEKETEKELV KKTLIKEFSN RVCFSIEPVS ECRRGLESEK TSNKKIRFTC1560
 1561 MPRHSKNARR FLKEAREQTV ADLVDFPVSF VESVKIPTAC VAY

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