YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	egl-17
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKVLLTLML STNFRNTCAR FQIKPNVHYL GETHWQLFNE CSQGMLQSFL GSLNTRGYPD  60
   61 KHCLTDWNVV GEWDGKFRLQ HAQSRKFLCF NKRARITLRF NGSDAKCTFI EEVRDNGFSR 120
  121 LRSSWKPELY LGFNGRGRFQ NPLSYHLKPR CFDWIKLVRY VAESEKSVCS TPPKPKLSPS 180
  181 PLEHSSFVHH AVRSNFLKKV SATHDSLYRT MKSRKS

Type	Start	End	Confidence
Signal Peptide	1	19	0.91
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	216	0.99