YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE26220
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFHFLKFL TINNFSRYCL KIVKVHIIWI TIICIIYFNW RFKKLDFMAI PYPPAVIKFN  60
   61 TSAKYLSSNL ASSSQLGNNI FEIASLYGLS KHLNRTPLFF IENGYHKKML DNLRKTMPRL 120
  121 MEKFRILNGS VPRSISETKF QRACCLHKSP WSLEKNRDEY LHLSGKYYQS WKYFPNMRNE 180
  181 LIEFLNPTSI QIFGNLPISD DQNHVTCVHS RRGDFVEYLF YASDPKFMKN AVTFLNENEK 240
  241 VGSRNRKIVL FGDDLNFLET YFSDAVLSTD VGKNAEYYIS QNPPIDDFLY SKNNCDVVLI 300
  301 TAPRSTFGWW IGYFSKGNKV YYLDIKYTGD HIFESGGLIA SDFYPSHWTP LKFASANSFT 360
  361 VVRS

Type	Start	End	Confidence
Cytoplasmic	1	19	0.81
Transmembrane Helix	20	40	0.87
Non-Cytoplasmic	41	364	0.90