YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE26194
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFHFGTEET ILFDFWKTET AVGIAVACFI TVLLAFLMET LRFFRDYRKA QTQLHQPPIS  60
   61 PEDRLKRSPQ LDLIDPLLQL FQLTIAYFLM LIFMTFNAYL CFFTVVGEVV CHLLYRTLYP 120
  121 NLNSSSAGHC

Type	Start	End	Confidence
Non-Cytoplasmic	1	19	0.70
Transmembrane Helix	20	41	0.90
Cytoplasmic	42	82	0.66
Transmembrane Helix	83	107	0.77
Non-Cytoplasmic	108	130	0.52