YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE26190
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLARSIIRC SRSICCAQFQ TPSSSRFLHT SRQLHEKEPT PKKPDDQKWK MFRMTMSEEQ  60
   61 KLAKTAKIEQ MKAEEAPKTL FAKVKYYFKR YWYIAVPAHA ASCTAWFIAL YLVVKSGVDV 120
  121 ISLLEWLHMP DAIVEKVKNT PETAGVVVVS LILYKIAMPF RYMTTLLLIQ ATFWTLRRLG 180
  181 KLKTAREVEY KVRSEYELNK AHYGRRWYRY RHLGVRSVSR KNSVHATTAH IGQVQRLQKE 240
  241 HEKLNEPTTT KLHDNNNNKK KDD

Type	Start	End	Confidence
Cytoplasmic	1	90	0.96
Transmembrane Helix	91	113	0.87
Non-Cytoplasmic	114	156	0.92
Transmembrane Helix	157	176	0.82
Cytoplasmic	177	263	0.91