YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE26137
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTLRSSSR SRSNDSQCKT KLKIILIYIG ILIISAPIAY GLTVLTSNGS EPMSHENISY  60
   61 TPIRSRGDII PLNPDWGENY AKFTYDIISN TYSYKRHGGS SFEPYSVFNV QRVENRTLGA 120
  121 VYFKILIKGL LELWLEWKFD LKSEGKSIEK IVIKMEGIQE IADGNGIIKA CPYLLNICPK 180
  181 IPINQSLTIE KPTSDKLFIH INLDKDIKVF KADLKNGNKV ESFSIEVYWG VSDQYFLSIY 240
  241 FYSPSEIIPL HPDLEDNYVK FTYDIISNTY SHKRQNGSSL EPYFVGNVKR VENRTLGVVY 300
  301 FEKIDKTIIG TILWEFGLKV VGKSIEKIVI KMNGMQEIDD YGESAAACQP SLNKCTEIQI 360
  361 NDSLTIEKPS DQIAISISMN EDIKVLKAEL KEGNKVESFS VEVYWGELIF ILSFKLTAVK 420
  421 VFQALMREKY KLSKM

Type	Start	End	Confidence
Cytoplasmic	1	20	0.95
Transmembrane Helix	21	44	0.88
Non-Cytoplasmic	45	435	0.98