YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	par-2
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDLDTSSAQ IRASQSDLSI ANSSPRLLES NATTSTACIN DVQQPVRRDL SSELLCPLCD  60
   61 QLFDRPVMVT CGHSYCEPCI ERHTRDTRAC VICKLDVGPF AAMIPSITLD NMVRKLKNQE 120
  121 NIESSYDDLF ICEEKLQKAP TPPISEEIPA QKMTRSLSQR SKRRLFFSIA GPTICSREKC 180
  181 KFPDFSGEKS TLNPTNWRKN KKKIQLKIKF LRKMLTFLMK TEMARFPIIS SISWLSPNFC 240
  241 SIWSNFLPIF SQLPRIFSIF HRFPPIFMDF MPFSPLFPPS FLKISRKPPM SHKRYTIDEA 300
  301 SEVMKSFNQQ KYVDLRESSV ESDRMLEEML EKQKQLVWKS VRIARISREK DRAEKTETLM 360
  361 EEVRFFWSIE MQCRHAVEDW KRRKRENDRK RRTDKVVTET LVQKKRRRKV EEEVEEDQME 420
  421 DRNEDRDEEF DHGEGCSGY

Type	Start	End	Confidence
Cytoplasmic	1	225	0.70
Transmembrane Helix	226	247	0.62
Non-Cytoplasmic	248	265	0.81
Transmembrane Helix	266	284	0.50
Cytoplasmic	285	439	0.54