YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE25910
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATFERLDQ VALLALVTVA ALNYQIFTYQ RKFLMPAELY TYFPAMIHQK FFPPTRSIGK  60
   61 LTPGIVHSAS ALELPSTGQL FCFVETSAVH YDDRVPSIAS TWLPKCDNGR FFTKTPLPNS 120
  121 NMTYSTVYLN LKDSYYDLFR KTTFGFYYSY MHISKSFDWY LKADDDTYFA MDHLKEYLST 180
  181 LDPTKPLYLG YVLKPYFKNG YNSGGSGYIL SNAAVKLFVE KLYHDEYTCP YDWAEDRGMG 240
  241 RCMARAGIFP TDTRDDKGLN RFMPFKPSEL AGVGPEWHYY PMEAGQYASQ KFVSLHRLPQ 300
  301 DMMISLDDIL HPKLGKRVYN PKFVKLD

Type	Start	End	Confidence
Signal Peptide	1	21	0.70
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	327	0.97