YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE25907
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPLSKLCAG AVTQNVLKSY FLTPSQFRSF SRTITALEKS QKSPSKQEHA LQRSILEEVL  60
   61 VHEKAKPTTF GGKVAEKASN TFMYTAVVAG IGLIGAFIYV LAGEFFAQDS PQTIFNKALA 120
  121 LVRDDGRCQE IFGASIAGFG EETSRGRRRH VAHHKYEKDG MQRIRVLFHV KGDRDEGIAQ 180
  181 AEMEQRDGDW QWRFLYVENK RRPKTTHVLI DNR

Type	Start	End	Confidence
Cytoplasmic	1	81	0.96
Transmembrane Helix	82	103	0.93
Non-Cytoplasmic	104	213	0.97