YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	fbxb-95
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPSFPVLR LPSKALRATL QNFAIIDLLS FSLVSPNSVR SLNIRAANVS VTLDFIEIFL  60
   61 VEAAGTHSMF YIKPKSHQNR EFPIHPVCRW LNRNFSIEKI IKNFLVALNL LEVKQLRVSK 120
  121 EDATCGKLTG IKFKHVTMVE RNRPIFDRFY RDSDSLTLYD RALLGEQTRA IFSENVNSLV 180
  181 LIPSFVVDFN DLLAINATKV DIGRSFTLSN LNLFLRHFIN GSNPRLKEIH VSLKGNNLED 240
  241 FKTTLLNSIK YWTSSISKTY EDGRSIDGLG FLRIDGVEVT IFVDPIRHSY ELTC

Type	Start	End	Confidence
Signal Peptide	1	41	0.71
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	294	0.98