YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE25820
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALASSNATS MEELFGNPFR PKKERVVVEE KPFEYTPSAY VQMIDQMIGI KTRPWNPERT  60
   61 PIKPIQMLTL PEMSREERWI QWGMENCTVK ASISGVLGVG VGFAFGLFTA SVDPQLSMVG 120
  121 GDPTKQLTLK QTWKEMSSRM KSYGKNFGSI GLMFSGTECA LETIRAKSDW RNGTYSGGIV 180
  181 GGLLGLRAGI MPAVWGAAGF AVFSTIIDHY MRG

Type	Start	End	Confidence
Cytoplasmic	1	87	0.98
Transmembrane Helix	88	110	0.88
Non-Cytoplasmic	111	182	0.85
Transmembrane Helix	183	207	0.83
Cytoplasmic	208	213	0.68