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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: nrx-1
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQKFDDTGQ YLTIWLVFTV SLFSVVDSII LTGAPDSYAR YPKWAHSFEN SLSMELKTRQ  60
   61 SDGMLLYTDD GGTHGNFYSL TIVEGHIQLD FRLGDNSNEF GQRRPVNTIR IEEVRIDDDK 120
  121 WHTLTIFQSW ENVKLELDYT LVFKILNQRS FVFGNILKNS DVFIGGLPPN MHMLPVMSSP 180
  181 LRRYARHLAV NVRNLMYRQY PQGVTSPQLL ESVGTRTNED DHCKSKSMSS REQFVCLNDG 240
  241 ECYSSNDGPH CDCQFSDHDG RNCEIEKNDG ELTFGGDEWV GYDVSLNISA AVRAKKENLT 300
  301 LTFKTVHGTS MLFYAGDEKS YLHVMLQDGA IIASSKFDGS DARIIRMFNS FPSQRYDDDS 360
  361 WHTIILERSL QMMTLIVDGR RDEIRQYAPE LDWISNSFGF LGSIPKHNPS KEVNRVSFRG 420
  421 CMKKVRYDID ATRILLVNLA DQSYGGSVVK TEGDISYSCK NPSQRSDVLS FTETSSYLTL 480
  481 PRWNSLSSGS LSFHFRTTSS DGLILYHGVM QHNATDYVAF ELIDSHLFMI INLGSGVVRL 540
  541 QTTSMKVSDG EWHHVQLDRL SRTGSVIVDA IKIDFSTPGV SANLIIDDPI FIGNVPNNSL 600
  601 VYPSSVWSIA LQKGYTGCIK NIRMNGVSTK IGQEFEASNS TGIELGCSLS NELDICEPNP 660
  661 CQNFGKCSKN LNSFDCDCSN TNFEGKQCEL EQTAVEVNGE ESKVHVLAHT KVSQVEHIKI 720
  721 RFRTTSSRGV LFDTGANGKN DKITVFLNDS QLNLFLQDSS TNNTFSWGKS LSDNHWHELQ 780
  781 VRRLGQKLLL YLDGFWSHSI YLQNPISVEI DEVGAAFSVH SSAPPPRDEH FKGFLSKLVF 840
  841 NGNDYLAKTK MNSAQLSKSS SRESKGQRNV KTRIASISFT NSTGYVAFSS DKISGLTGSF 900
  901 RVQFKFQTLM RSALLFFTLP KHDYDQSFRL QMLNGRLKYT YRTSGQEFHT TSPKLPHRQH 960
  961 LSDMRWHNVL IYQDEKTHDH VLLVDNSSTT LIIDKIKKVE SKMSGKLYFG SNPLGVSRPS1020
 1021 NGFRGCISTL RINENALDLY EDADSRMKVN RGCSVLTLFE LFQFECKLLN VYNSGPIARC1080
 1081 IEDACANHGR CIQLWSSIRC DCSLTAHSGD RCQNPSTTVR FDGSPSAIFY EYAPNERPTT1140
 1141 SKDYFVFSFR TTQPNGVLIS IECAADQDYF TIFLNKGYLN AHYNLGNRDH TTSYHTRILN1200
 1201 DGFPHVIKIS RTEANMTIQV DKLPSLRYRP KRASDLVLLN MQTRISIGAA FNTRHLDQKR1260
 1261 LLRHRRNTEI FDSYQGEISG VNVNGLMILD LYENGSNRIH TIGAPQTTAV SEQVSSESEE1320
 1321 DDELAEMMMA HSIDENPNEA LIESLAPSCL SLEEQQSCFI DTDDSTGFFS PVLPTVANFP1380
 1381 TTRQTEHIDN EVTALITSSL APQKTRPKST PHFTVYPVRP TTPMGDTITT TMQAATVTDF1440
 1441 PRTPLIMCSS LAVIIAIAAV VFFVFKCRQN PPNSEHYTMA MKSQSGYTAI APELSPPMNH1500
 1501 DRSNDSCTQP LLAKPHINGN GYEPLKGAVI ANGNGATATM MRNGNGNGVA KKKDFKEWYV1560
 1561 

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