YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE25763
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALSFKLST VFFFFLTMPY RAELKRPDLK GSFPCSICQK VFCHSSSLSR HRMQAHFKSY  60
   61 TCTTCNNEIP SNDTLRSHMY RVHNITRMFM CRCCNWAFPD KTSLHIHMQS MLKNGTPGEA 120
  121 AVLAKSSDVV DSTSESGSPR QSPPFSPDLL MQKRMLQVAA NNNNIGSIFP TLLKSPDSKS 180
  181 MFPLDLSNMG PSQFLSAWLA NNPINTAALN LAAQQTPSKD SIQSSNISDY DDLEVQTTEE 240
  241 DIKFEVESSD VSPRSVIVKT EPTFKRELEH DADIDVEGDD GEPPLKMTID DKNIHISHDQ 300
  301 PSPTVSDSHI SGGSSSHSGE SLKCFDCQVA RGKLVAVEDK CRAYEKTIRE LQVQVDFLRK 360
  361 IQPNPMPPVM LPPPMMPMPS PGPNNLFQNP AMRMLLNNLI HMNRPSVVP

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	409	0.99