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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pcp-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWFLVLLLV ALVSVEASRR SRLFKKLYQK ASNYDAAPSN VQTVWYKNMK LDHFTWGDTR  60
   61 TFDMRVMWNN TFYKPGGPIF FYTGNEGGLE SFVTATGMMF DLAPMFNASI IFAEHRFYGQ 120
  121 TQPFGNQSYA SLANVGYLTS EQALADYAEL LTELKRDNNQ FKMTFPAATQ VISFGGSYGG 180
  181 MLSAWFRQKY PHIVKGAWAG SAPLIYMNGG GVDPGAFDHI TSRTYIDNGC NRFILANAWN 240
  241 ATLNLSSTDA GRQWLNNNTV FKLDPRTKIR NQTDGWNLNA YLREAIEYMA MVDYPYPTGF 300
  301 LEPLPAWPVT VACGYMNANG TSFSDKDLVK AVANAANIYY NYNRDPNFTY CIDFSICGDQ 360
  361 GTGGLGGDEL GWPWQECSEI IMAMCASGGS NDVFWNECGK DIYQTLQQGC VSIFKSMGWT 420
  421 PKNWNIDAVK TLYGYDLSGS SNLILTQGHL DPWSGGGYKV DQNNAARGIY VLEIPGSAHH 480
  481 LDLRQPNTCD PNTVTNARFQ IIQILKCWVD PNCNTIPTIS PLPSISIPNG DCKDVVGGYP 540
  541 WGQTTGATVS NSFILAILAS LYAMF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle