YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDU5_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQFPSIRGN INEKMMTTMV ESQTRSPWRT PVPYLFGGLA AMLGLIAFAL LLLACSYWRL  60
   61 SRQTEDEEKQ TESGEKVVAK AFEEKILVIM AGQNNPTFLA TPVAAKICLD CVNMEKKEGQ 120
  121 NGESKVTEEN H

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.52
Transmembrane Helix	34	55	0.93
Cytoplasmic	56	131	0.52