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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PP349_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVTSTTFIS TTRSSKYLTL TSYSPVILPA STLRRDFLGC CHSLRPSPHL RTRAGKRNSR  60
   61 RSSIRSPRLV VRASIDSGLI LIVVAVTAFS AIAFAYCQST FRKRKSSDEV ATVHGGKNSA 120
  121 ENRREIHGDI HEGNPVEINV GFRKVEEESV NLLEEEKAHQ IHEVAVMDYD SVSAEDSQFA 180
  181 VASVTTVATA HTLIDESFSS SIVNGSVALE SATFGVKTPE KQVGNSEDQK GLEHDFSQAV 240
  241 VGIHSIASPQ VVDDTRALEY EYNGLLQKPL EYSIFAESKR EEIHTFYGSN HSSAKSSRLP 300
  301 SLKAVSPAVT SATNSLFLDH KNNGVIDTQF PGQSSGQATG DVQEENLVAH SNGGVSHIRK 360
  361 DVKGDWKFPS DGKHVGHQID ESMPQFPARN FELHNSNGRS PETSDAYNRL LRDGRIKDCI 420
  421 SLLEDLDQRD LLDMDKIYHA SFFKACKKQR AVKEAFRFTK LILNPTMSTF NMLMSVCASS 480
  481 QDIEGARGVL RLVQESGMTA DCKLYTTLIS SCAKSGKVDA MFEVFHQMSN SGVEANLHTF 540
  541 GALIDGCARA GQVAKAFGAY GILRSKNVKP DRVVFNALIS ACGQSGAVDR AFDVLAEMKA 600
  601 ETHPIDPDHI SIGALMKACC NAGQVERAKE VYQMIHKYGI RGTPEVYTIA VNSCSKSGDW 660
  661 DFACSIYKDM KEKDVTPDEV FFSALIDVAG HAKMLDEAFG ILQDAKSQGI RLGTISYSSL 720
  721 MGACCNAKDW KKALELYEKI KSIKLRPTIS TMNALITALC EGNQLPKAME YLDEIKTLGL 780
  781 KPNTITYSML MLASERKDDF EVSFKLLSQA KGDGVSPNLI MCRCITSLCK RRFEKACAGG 840
  841 EPVVSFKSGR PQIENKWTSM ALMVYRETIS GGTVPTTEVV SQVLGCLQLP HDAALRDRLI 900
  901 STLGINISSQ KQHNIFPLVD GFGEYDPRAF SLLEEATSLG VLPSVSFNKI PLFFDTTELP 960
  961 KNVAEVYLLT IFKGLKHRLA AGAKIPHINL IISIQEKEIR TPEGEKTIDL TGRVGQEIGA1020
 1021 LLRRLDIPYH RKDSRLRING VSLKNWFQPK LDSPFSGGKP GDLRSSQVPL GNQISRQQRS1080
 1081 IRLGNLSLE

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