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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSLG3_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQVSLKQFV FLLKIKSTTM EPHRKHSVGD TTLHTCHPCR RTIPYRIYAV FHTCGIIALM  60
   61 YHHVHSLLTA NTTLITSLLL LSDIVLAFMW ATTTSLRYKP VRRTEYPEKY AAEPEDFPKL 120
  121 DVFICTADPY KEPPMMVVNT ALSVMAYEYP SDKISVYVSD DGGSSLTLFA LMEAAKFSKH 180
  181 WLPFCKKNNV QDRSPEVYFS SKLRSRSDEA ENIKMMYEDM KSRVEHVVES GKVETAFITC 240
  241 DQFRGVFDLW TDKFTRHDHP TIIQVLQNSE NDMDDTKKYI MPNLIYVSRE KSKVSSHHFK 300
  301 AGALNTLLRV SGVMTNSPII LTLDCDMYSN DPATPVRALC YLTDPKIKTG LGFVQFPQTF 360
  361 QGISKNDIYA CAYKRLFEIN MIGFDGLMGP NHVGTGCFFN RRGFYGAPSN LILPEIDELK 420
  421 PNRIVDKPIN AQDVLALAHR VAGCIYELNT NWGSKIGFRY GSLVEDYYTG YRLHCEGWRS 480
  481 VFCRPKRAAF CGDSPKSLID VVSQQKRWAI GLLEVAISRY SPITYGVKSM GLVTGVGYCQ 540
  541 YACWAFWSLP LIVYGFLPQL ALLYQSSVFP KSSDPWFWLY IVLFLGAYGQ DLLDFVLEGG 600
  601 TYGGWWNDQR MWSIRGFSSH LFGFIEFTLK TLNLSTHGFN VTSKANDDEE QSKRYEKEIF 660
  661 EFGPSSSMFL PLTTVAIVNL LAFVWGLYGL FAWGEGLVLE LMLASFAVVN CLPIYEAMVL 720
  721 RIDDGKLPKR VCFVAGILTF VLIVSGYVFL K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle