YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE25462
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLQWTIVAG VLYAEIAITF TLLLPWIRPT LWSKLFKSRL FTALAKHAHI YSITFGFVLF  60
   61 ILFADGVRET MKYNGLEGQM GRTAESDATH HMRLFRAQRN LYISGFALLL WLVIQRIMTL 120
  121 LGRAAQLEAA SEAAMRQAES ATKTARTLMN SADTNEEAAG LAKQIEKLKG ELKSANTDRD 180
  181 TLKKQSEGLQ REFDRVSDLL RDSAESKGDK KKD

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.74
Transmembrane Helix	7	27	0.93
Cytoplasmic	28	46	0.74
Transmembrane Helix	47	67	0.89
Non-Cytoplasmic	68	100	0.77
Transmembrane Helix	101	120	0.86
Cytoplasmic	121	213	0.80