YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145328274
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMVVRGAPA IAIAAALSLA VEVFNFHGFD GSASDAVAFL ENKLDYLVSS RPTAVNLADA  60
   61 ALKLKHVIAK ALATATEAKS IFKAYIEASE DMLEDDVVSN KAIGNFGLSL LRQQAKNPDK 120
  121 LSVLTHCNTG SLATAGYGTA LGVIRALHTQ GILERAYCTE TRPFNQGSRL TAFELVHEKI 180
  181 PATLIADSAA AALMKDGRVD GVIVGADRVA SNGDTANKIG TYSLALCAKH HGIPFYVAAP 240
  241 LTSVDLSLSS GKEIVIEERS PKELMHTHGG LGERIAAPGI SVWNPAFDMT PAELIAGIIT 300
  301 EKGVITKNGN DTFDISSFAK KITGNSSR

Type	Start	End	Confidence
Signal Peptide	1	20	0.80
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	328	0.98