YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145332705
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMATRTLGF VLPTSLSSQP SFDRRGGGFR VSVIRCSTSP LTFPTSGVVE KPWTSYNARL  60
   61 VLEDGSIWPA KSFGAPGTRI AELVFNTSLT GYQEILTDPS YAGQFVLMTN PQIGNTGVNP 120
  121 DDELLQMSRS WDIVGIDLIS DVSCKSPYEW VDKTNAEWDF NTNSRDGKSY KVIAYDFGIK 180
  181 QNILRRLSSY GCQITVVPST FPAAEALKMN PDGILFSNGP GDPSAVPYAV ETVKELLGKV 240
  241 PVYGICMGHQ LLGQALGGKT FKMKFGHHGG NHPVRNNRTG QVEISAQNHN YAVDPASLPG 300
  301 GVEVTHVNLN DGSCAGLSFP EMNVMSLQYH PEASPGPHDS DNAFREFIEL MKRSKQSS

Type	Start	End	Confidence
Signal Peptide	1	20	0.83
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	358	0.99