YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|145329172
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSSLQLKRM ESAYRLWIRE KKDEICKELQ AALGTAKWQL EEFEKAVRLS HKRCGDNDSS  60
   61 STRHKQFVTA IENQIHRVET SLQEAYSENG KKPLRWVDLN EEERDDLAMF LSGSSRTSQS 120
  121 FSGESSIKSR ESTNSSLVEN VMEVSAKVTF KKAKVYGDGS ECVIDIEERV TPGQAEKSVG 180
  181 LRRIWSSPNF NSLRIIVPGG DNEEEKETLV AQIEATPKVK GTKSVLWMQR LPDHNQLFDK 240
  241 TGCFQNPIRL PFNHPIKFIV SLLLMVFLLL PFVVYLS

Type	Start	End	Confidence
Cytoplasmic	1	253	0.53
Transmembrane Helix	254	276	0.88
Non-Cytoplasmic	277	277	0.54