YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE25187
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAIRILSSS ILPRCYPLVL SVIFGICHQT MLKSTGLQAW ILDESANRRE NLITANAEGL  60
   61 TSLMGYLTIF YASLAIGEFM AKTSIRIKSW IRRCFQLFAL SLILFFIQIA AEKCVDPPCR 120
  121 RVVNATYIFS QLTLMTFATG VCLSIQMFNT VAWCSSFPQF SNGEDPYSVV SPCLSDSINR 180
  181 HSLLFFLVSN VLTGLVNSRL MLIASLRTLP SPFSWHMSLC APVSCTF

Type	Start	End	Confidence
Cytoplasmic	1	11	0.92
Transmembrane Helix	12	32	0.92
Non-Cytoplasmic	33	61	0.89
Transmembrane Helix	62	81	0.87
Cytoplasmic	82	93	0.74
Transmembrane Helix	94	111	0.88
Non-Cytoplasmic	112	127	0.81
Transmembrane Helix	128	150	0.82
Cytoplasmic	151	182	0.82
Transmembrane Helix	183	206	0.71
Non-Cytoplasmic	207	227	0.70