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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gcy-2
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSSILKFVI LIHSTFHSTF AQNLPDTTVA PKTKRTIKIG IAAAQRTQTS SIGWSVCGGA  60
   61 VPMAIERLRE FGYVKDFDFE FIVDYTECDQ GSVVRAGIEF IKTHKVDVII GPPCAQALRV 120
  121 MSFLAENYKK PVLGWGFVSD TDLSDVIRFP YLTTVIPNSL MLGYAASKML TVYNWGRVAM 180
  181 LYYYSDIKYC SGVMNDVEAT FNNPSTPNVN IVIKAEIYLN DNETTDIVFQ SVKSRARIIF 240
  241 WCTQTAIEKR DYLIKIATHD MIGDEYVHIM LSMRNIAFGA QTSLGKPTFS QSGLTPIWES 300
  301 FTEGTDDFEK MVKQAATRMF VLDVNSEVAD KKYLDYLQKN IMKAVQSPPM NCSTVECMTA 360
  361 NTTIMGGYAR QLFDVVYLYG VALTNTNSTD PAVYDDVDVI VPQFVTSFQG MTGKVVISPN 420
  421 LTRMPIFQLY GLNSDYEQVA LAEFTYIDPI MNVTLSYKEE GGAVWYFYGN SRPLDIPICG 480
  481 FLGKFCPISF WEQYMILAIV SISVIVLMVI IMIIGCLCVI SAKHAEQART NAEWQVPFVN 540
  541 LMESEKQIRS NATSRRSLQS APSISTGHSG VTTVSDFCEN YTMMMYEKEM VLTAKYQYTH 600
  601 LTKADKERFV KMRKLDHENI NRFIGLSIDS AHFIAVTKLC SRGSLQDILS RGNFSMDYFF 660
  661 MFCIIRDVAK GLEYLHKTFL RLHGNLRSAT CLVNDSWQVK LAEYGMDNLV EEQTPPKKRL 720
  721 LWVAPEVLRG SLSVSQMEPS ADIYSFAIIA SEILTKKEAW DILDRKEDCE ALIALVKDCW 780
  781 AEVPEDRPTA ENICSQMKGL VSKQKTNLMD HVFNMLEEYT STLEEEIEER TKELTLEKKK 840
  841 ADILLSRMLP KQVAERLKAG QTVEPEGFDS VTVFFSDVVK FTILASKCSP FQTVNLLNDL 900
  901 YSNFDTIIEQ HGVYKVESIG DGYLCVSGLP TRNGYAHIKQ IVDMSLKFME YCRSFKIPHL 960
  961 PRENVELRIG VNSGPCVAGV VGLSMPRYCL FGDTVNTASR MESNGKPSLI HLTSDAHLLL1020
 1021 LTHYPNHYDT SSRGEVIIKG KGVMETFWVH GRIDDIAEPT ELRSICKPST VANERWITPP1080
 1081 APKPEIRSVS SHGSRPPSVY DPLQDHRKFK MDTLKVAN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle